ij.plugin
Class SurfacePlotter

java.lang.Object
  ij.plugin.SurfacePlotter

All Implemented Interfaces:

PlugIn

public class SurfacePlotter
extends java.lang.Object
implements PlugIn

Field Summary

(package private) double	angle
(package private) double	angle2
(package private) double	angle2InDegrees
(package private) double	angleInDegrees
(package private) static boolean	blackFill
(package private) static boolean	firstTime
(package private) ImagePlus	img
(package private) boolean	invertedLut
(package private) LookUpTable	lut
(package private) static boolean	oneToOne
(package private) double	p1x
(package private) double	p1y
(package private) double	p2x
(package private) double	p2y
(package private) double	p3x
(package private) double	p3y
(package private) static int	plotWidth
(package private) static int	polygonMultiplier
(package private) static boolean	showAxis
(package private) static boolean	showGrayscale
(package private) static boolean	showWireframe
(package private) static boolean	smooth
(package private) static boolean	whiteBackground
(package private) int[]	x
(package private) int[]	y
(package private) double	yinc2

Constructor Summary

SurfacePlotter()

Method Summary

(package private) void	clearAboveProfile(ImageProcessor ipProfile, double[] profile, int width, double yinc2)
(package private) void	drawAndLabelAxis(ImageProcessor ip, ImageProcessor ip2, java.awt.Rectangle roi)
(package private) void	drawAxis(ImageProcessor ip, int x1, int y1, int x2, int y2, java.lang.String label, int offset, int offsetXDirection, int offsetYDirection, int labelSide)
(package private) ImageProcessor	drawString(ImageProcessor ip, java.lang.String s, int a)
(package private) void	fixLut(ImageProcessor ip)
ImageProcessor	makeSurfacePlot(ImageProcessor ip)
void	run(java.lang.String arg) This method is called when the plugin is loaded.
(package private) boolean	showDialog()
(package private) ImageProcessor	trimPlot(ImageProcessor plot, int maxTrim)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

plotWidth

static int plotWidth

polygonMultiplier

static int polygonMultiplier

oneToOne

static boolean oneToOne

firstTime

static boolean firstTime

showWireframe

static boolean showWireframe

showGrayscale

static boolean showGrayscale

showAxis

static boolean showAxis

whiteBackground

static boolean whiteBackground

blackFill

static boolean blackFill

smooth

static boolean smooth

img

ImagePlus img

x

int[] x

y

int[] y

invertedLut

boolean invertedLut

angleInDegrees

double angleInDegrees

angle

double angle

angle2InDegrees

double angle2InDegrees

angle2

double angle2

yinc2

double yinc2

p1x

double p1x

p1y

double p1y

p2x

double p2x

p2y

double p2y

p3x

double p3x

p3y

double p3y

lut

LookUpTable lut

Constructor Detail

SurfacePlotter

public SurfacePlotter()

Method Detail

run

public void run(java.lang.String arg)

Description copied from interface: PlugIn

This method is called when the plugin is loaded. 'arg', which may be blank, is the argument specified for this plugin in IJ_Props.txt.

Specified by:

run in interface PlugIn

showDialog

boolean showDialog()

makeSurfacePlot

public ImageProcessor makeSurfacePlot(ImageProcessor ip)

drawAndLabelAxis

void drawAndLabelAxis(ImageProcessor ip,
                      ImageProcessor ip2,
                      java.awt.Rectangle roi)

drawAxis

void drawAxis(ImageProcessor ip,
              int x1,
              int y1,
              int x2,
              int y2,
              java.lang.String label,
              int offset,
              int offsetXDirection,
              int offsetYDirection,
              int labelSide)

drawString

ImageProcessor drawString(ImageProcessor ip,
                          java.lang.String s,
                          int a)

clearAboveProfile

void clearAboveProfile(ImageProcessor ipProfile,
                       double[] profile,
                       int width,
                       double yinc2)

trimPlot

ImageProcessor trimPlot(ImageProcessor plot,
                        int maxTrim)

fixLut

void fixLut(ImageProcessor ip)