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| Packages that use ImagePlus | |
|---|---|
| ij | |
| ij.plugin | |
| ij.plugin.filter | |
| ij.process | |
| org.lego.navigation.img | |
| Uses of ImagePlus in ij |
|---|
| Subclasses of ImagePlus in ij | |
|---|---|
class |
CompositeImage
|
| Methods in ij that return ImagePlus | |
|---|---|
static ImagePlus |
IJ.createImage(java.lang.String title,
java.lang.String type,
int width,
int height,
int depth)
Creates a new imagePlus. |
ImagePlus |
ImagePlus.createImagePlus()
Returns a new ImagePlus with this ImagePlus' attributes (e.g. spatial scale), but no image. |
static ImagePlus |
ImagePlus.getClipboard()
Returns the internal clipboard or null if the internal clipboard is empty. |
static ImagePlus |
WindowManager.getCurrentImage()
Returns the active ImagePlus. |
static ImagePlus |
IJ.getImage()
Returns a reference to the active image. |
static ImagePlus |
WindowManager.getImage(int imageID)
For IDs less than zero, returns the ImagePlus with the specified ID. |
static ImagePlus |
WindowManager.getImage(java.lang.String title)
Returns the first image that has the specified title or null if it is not found. |
static ImagePlus |
WindowManager.getTempCurrentImage()
Returns tempCurrentImage, which may be null. |
static ImagePlus |
IJ.openImage(java.lang.String path)
Open the specified file as a tiff, bmp, dicom, fits, pgm, gif or jpeg image and returns an ImagePlus object if successful. |
| Methods in ij with parameters of type ImagePlus | |
|---|---|
(package private) void |
ImageJ.abortPluginOrMacro(ImagePlus imp)
|
(package private) static void |
Menus.addWindowMenuItem(ImagePlus imp)
Adds one image to the end of the Window menu. |
(package private) static void |
WindowManager.checkForDuplicateName(ImagePlus imp)
|
void |
ImagePlus.copyScale(ImagePlus imp)
Copies the calibration of the specified image to this image. |
(package private) ImageStack |
CompositeImage.getRGBStack(ImagePlus imp)
|
void |
ImageListener.imageClosed(ImagePlus imp)
|
void |
ImageListener.imageOpened(ImagePlus imp)
|
void |
ImageListener.imageUpdated(ImagePlus imp)
|
(package private) static boolean |
Menus.isColorLut(ImagePlus imp)
|
static void |
WindowManager.setTempCurrentImage(ImagePlus imp)
Makes the specified image temporarily the active image. |
static void |
Undo.setup(int what,
ImagePlus imp)
|
static int |
IJ.setupDialog(ImagePlus imp,
int flags)
Displays a "Process all slices?" |
static void |
IJ.showTime(ImagePlus imp,
long start,
java.lang.String str)
|
static void |
IJ.showTime(ImagePlus imp,
long start,
java.lang.String str,
int nslices)
|
| Constructors in ij with parameters of type ImagePlus | |
|---|---|
CompositeImage(ImagePlus imp,
int channels)
|
|
Executer(java.lang.String cmd,
ImagePlus ignored)
Create an Executer that runs the specified menu command in a separate thread using the active image image. |
|
| Uses of ImagePlus in ij.plugin |
|---|
| Subclasses of ImagePlus in ij.plugin | |
|---|---|
class |
BMP_Reader
This plugin reads BMP files. |
class |
ColorPicker
Implements the Image/Color/Color Picker command. |
class |
DICOM
This plugin decodes DICOM files. |
class |
FITS_Reader
Opens and displays FITS images. |
class |
LutLoader
Opens NIH Image look-up tables (LUTs), 768 byte binary LUTs (256 reds, 256 greens and 256 blues), LUTs in text format, or generates the LUT specified by the string argument passed to the run() method. |
class |
PGM_Reader
This plugin opens PxM format images. |
(package private) class |
Plots
|
| Fields in ij.plugin declared as ImagePlus | |
|---|---|
(package private) static ImagePlus |
GelAnalyzer.gel
|
(package private) ImagePlus |
GifEncoder.image
|
(package private) ImagePlus |
SurfacePlotter.img
|
(package private) ImagePlus |
StackEditor.imp
|
(package private) ImagePlus |
ScaleBar.imp
|
(package private) ImagePlus |
PNG_Writer.imp
|
(package private) ImagePlus |
GelAnalyzer.imp
|
(package private) ImagePlus |
ColorGenerator.imp
|
(package private) ImagePlus |
BMP_Writer.imp
|
(package private) ImagePlus |
Selection.imp
|
(package private) ImagePlus |
FolderOpenerDialog.imp
|
(package private) ImagePlus |
SpecifyROI.imp
|
(package private) ImagePlus |
NextImageOpener.imp0
|
| Methods in ij.plugin that return ImagePlus | |
|---|---|
(package private) ImagePlus |
ZProjector.doMedianProjection()
|
(package private) ImagePlus |
ImageCalculator.duplicateStack(ImagePlus img1)
|
ImagePlus |
ZProjector.getProjection()
Retrieve results of most recent projection operation. |
ImagePlus |
Slicer.reslice(ImagePlus imp)
|
(package private) ImagePlus |
Slicer.resliceRectOrLine(ImagePlus imp)
|
| Methods in ij.plugin with parameters of type ImagePlus | |
|---|---|
boolean |
GifEncoder.addFrame(ImagePlus image)
Adds next GIF frame. |
(package private) void |
Selection.addToRoiManager(ImagePlus imp)
|
(package private) void |
Thresholder.applyShortOrFloatThreshold(ImagePlus imp)
|
(package private) void |
Thresholder.applyThreshold(ImagePlus imp)
|
(package private) void |
ImageCalculator.calculate(ImagePlus img1,
ImagePlus img2,
boolean apiCall)
|
void |
ImageCalculator.calculate(java.lang.String params,
ImagePlus img1,
ImagePlus img2)
|
(package private) void |
Commands.closeImage(ImagePlus imp)
|
(package private) void |
Thresholder.convertStack(ImagePlus imp)
|
(package private) void |
Thresholder.convertStackToBinary(ImagePlus imp)
|
void |
StackEditor.convertStackToImages(ImagePlus imp)
|
(package private) void |
Thresholder.convertToByte(ImagePlus imp)
|
(package private) void |
DICOM.convertToUnsigned(ImagePlus imp,
ij.io.FileInfo fi)
Convert 16-bit signed to unsigned if all pixels>=0. |
(package private) void |
Selection.convexHull(ImagePlus imp)
|
(package private) void |
Selection.createMask(ImagePlus imp)
|
(package private) void |
Selection.createMaskFromThreshold(ImagePlus imp)
|
(package private) void |
Scaler.createNewStack(ImagePlus imp,
ImageProcessor ip)
|
(package private) ImageStack |
Slicer.createOutputStack(ImagePlus imp,
ImageProcessor ip)
|
(package private) void |
Selection.createSelectionFromMask(ImagePlus imp)
|
void |
FFTMath.doMath(ImagePlus imp1,
ImagePlus imp2)
|
(package private) void |
ImageCalculator.doOperation(ImagePlus img1,
ImagePlus img2)
|
(package private) void |
ImageCalculator.doStackOperation(ImagePlus img1,
ImagePlus img2)
img1 = img2 op img2 (e.g. img1 = img2/img1) |
(package private) void |
Selection.drawEllipse(ImagePlus imp)
|
(package private) void |
Slicer.drawLine(double x1,
double y1,
double x2,
double y2,
ImagePlus imp)
|
(package private) void |
ScaleBar.drawScaleBar(ImagePlus imp)
|
(package private) ImagePlus |
ImageCalculator.duplicateStack(ImagePlus img1)
|
void |
ContrastEnhancer.equalize(ImagePlus imp)
|
(package private) int |
Selection.findFirstPoint(int[] xCoordinates,
int[] yCoordinates,
int n,
ImagePlus imp)
|
(package private) java.lang.String |
NextImageOpener.getName(ImagePlus imp)
|
(package private) ImageProcessor |
Slicer.getSlice(ImagePlus imp,
double x1,
double y1,
double x2,
double y2,
java.lang.String status)
|
(package private) java.lang.String |
StackEditor.getTitle(ImagePlus imp,
int n)
|
(package private) void |
Selection.invert(ImagePlus imp)
|
(package private) boolean |
DICOM_Sorter.isDicomStack(ImagePlus imp)
|
(package private) void |
ScaleBar.labelSlices(ImagePlus imp)
|
(package private) ij.gui.Roi |
Selection.makeConvexHull(ImagePlus imp,
ij.gui.PolygonRoi roi)
|
void |
MontageMaker.makeMontage(ImagePlus imp)
|
void |
MontageMaker.makeMontage(ImagePlus imp,
int columns,
int rows,
double scale,
int first,
int last,
int inc,
int borderWidth,
boolean labels)
|
(package private) void |
GelAnalyzer.plotLanes(ImagePlus imp,
boolean replot)
|
(package private) void |
GifEncoder.Process8bitCLT(ImagePlus image)
Gets Color lookup Table from 8 bit ImagePlus |
ImagePlus |
Slicer.reslice(ImagePlus imp)
|
(package private) ImagePlus |
Slicer.resliceRectOrLine(ImagePlus imp)
|
(package private) void |
JpegWriter.saveAsJpeg(ImagePlus imp,
java.lang.String path)
|
void |
ZProjector.setImage(ImagePlus imp)
Explicitly set image to be projected. |
(package private) void |
Thresholder.setInvertedLut(ImagePlus imp)
|
void |
ColorPanel.setup(ImagePlus imp)
|
(package private) int |
Histogram.setupDialog(ImagePlus imp,
int flags)
|
(package private) boolean |
Histogram.showDialog(ImagePlus imp)
|
(package private) boolean |
ScaleBar.showDialog(ImagePlus imp)
|
(package private) boolean |
Slicer.showDialog(ImagePlus imp)
|
(package private) boolean |
ContrastEnhancer.showDialog(ImagePlus imp)
|
(package private) boolean |
FolderOpener.showDialog(ImagePlus imp,
java.lang.String[] list)
|
(package private) void |
RGBStackConverter.sixteenBitsToRGB(ImagePlus imp)
|
void |
ContrastEnhancer.stretchHistogram(ImagePlus imp,
double saturated)
|
(package private) void |
Converter.unsupportedConversion(ImagePlus imp)
|
(package private) void |
PNG_Writer.writeImage(ImagePlus imp,
java.lang.String path)
|
(package private) void |
BMP_Writer.writeImage(ImagePlus imp,
java.lang.String path)
|
(package private) void |
Zoom.zoomToSelection(ImagePlus imp,
ij.gui.ImageCanvas ic)
|
| Constructors in ij.plugin with parameters of type ImagePlus | |
|---|---|
ColorCanvas(ImagePlus imp)
|
|
ColorGenerator(int width,
int height,
int[] pixels,
ImagePlus imp)
|
|
ColorPanel(ImagePlus imp)
|
|
FolderOpenerDialog(java.lang.String title,
ImagePlus imp,
java.lang.String[] list)
|
|
PlotsCanvas(ImagePlus imp)
|
|
ZProjector(ImagePlus imp)
Construction of ZProjector with image to be projected. |
|
| Uses of ImagePlus in ij.plugin.filter |
|---|
| Fields in ij.plugin.filter declared as ImagePlus | |
|---|---|
(package private) ImagePlus |
ThresholdToSelection.image
|
(package private) ImagePlus |
LineGraphAnalyzer.imp
|
(package private) ImagePlus |
RoiWriter.imp
|
(package private) ImagePlus |
Resizer.imp
|
(package private) ImagePlus |
Shadows.imp
|
(package private) ImagePlus |
Binary.imp
|
(package private) ImagePlus |
LutApplier.imp
|
(package private) ImagePlus |
Duplicater.imp
|
(package private) ImagePlus |
FractalBoxCounter.imp
|
(package private) ImagePlus |
Filler.imp
|
(package private) ImagePlus |
ImageProperties.imp
|
(package private) ImagePlus |
LutViewer.imp
|
(package private) ImagePlus |
Convolver.imp
|
(package private) ImagePlus |
XYWriter.imp
|
protected ImagePlus |
ParticleAnalyzer.imp
|
(package private) ImagePlus |
Transformer.imp
|
(package private) ImagePlus |
RGBStackSplitter.imp
|
(package private) ImagePlus |
CalibrationBar.imp
|
(package private) ImagePlus |
Profiler.imp
|
(package private) ImagePlus |
Projector.imp
|
(package private) ImagePlus |
ZAxisProfiler.imp
|
(package private) ImagePlus |
Benchmark.imp
|
(package private) ImagePlus |
EDM.imp
|
(package private) ImagePlus |
CalibrationBar.impData
|
(package private) ImagePlus |
CalibrationBar.impOriginal
|
| Methods in ij.plugin.filter that return ImagePlus | |
|---|---|
ImagePlus |
Projector.doProjections(ImagePlus imp)
|
ImagePlus |
Duplicater.duplicateStack(ImagePlus imp,
java.lang.String newTitle)
|
static ImagePlus |
Analyzer.getRedirectImage(ImagePlus currentImage)
Returns the image selected in the "Redirect To:" popup menu of the Analyze/Set Measurements dialog or null if "None" is selected, the image was not found or the image is not the same size as currentImage. |
(package private) ImagePlus |
Projector.zScale(ImagePlus imp)
|
| Methods in ij.plugin.filter with parameters of type ImagePlus | |
|---|---|
void |
LineGraphAnalyzer.analyze(ImagePlus imp)
Uses ImageJ's particle analyzer to extract a set of coordinate pairs from a digitized line graph. |
boolean |
ParticleAnalyzer.analyze(ImagePlus imp)
Performs particle analysis on the specified image. |
boolean |
ParticleAnalyzer.analyze(ImagePlus imp,
ImageProcessor ip)
Performs particle analysis on the specified ImagePlus and ImageProcessor. |
(package private) void |
ParticleAnalyzer.analyzeParticle(int x,
int y,
ImagePlus imp,
ImageProcessor ip)
|
(package private) void |
LutApplier.apply(ImagePlus imp,
ImageProcessor ip)
|
(package private) void |
LutApplier.applyRGBStack(ImagePlus imp)
|
void |
Calibrator.calibrate(ImagePlus imp)
|
ImagePlus |
Projector.doProjections(ImagePlus imp)
|
void |
Projector.doRGBProjections(ImagePlus imp)
|
void |
CalibrationBar.drawColorBar(ImagePlus imp,
int x,
int y)
|
void |
Filler.drawLabel(ImagePlus imp,
ImageProcessor ip,
int count,
java.awt.Rectangle r)
|
void |
Duplicater.duplicate(ImagePlus imp)
|
ImagePlus |
Duplicater.duplicateStack(ImagePlus imp,
java.lang.String newTitle)
|
java.lang.String |
Info.getImageInfo(ImagePlus imp,
ImageProcessor ip)
|
(package private) java.lang.String |
Info.getInfo(ImagePlus imp,
ImageProcessor ip)
|
static ImagePlus |
Analyzer.getRedirectImage(ImagePlus currentImage)
Returns the image selected in the "Redirect To:" popup menu of the Analyze/Set Measurements dialog or null if "None" is selected, the image was not found or the image is not the same size as currentImage. |
(package private) void |
Printer.print(ImagePlus imp)
|
void |
RoiWriter.saveRoi(ImagePlus imp)
|
void |
XYWriter.saveXYCoordinates(ImagePlus imp)
|
(package private) boolean |
ParticleAnalyzer.setThresholdLevels(ImagePlus imp,
ImageProcessor ip)
|
int |
LineGraphAnalyzer.setup(java.lang.String arg,
ImagePlus imp)
|
int |
GaussianBlur.setup(java.lang.String arg,
ImagePlus imp)
Method to return types supported |
int |
RoiWriter.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Resizer.setup(java.lang.String arg,
ImagePlus imp)
|
int |
FFTFilter.setup(java.lang.String arg,
ImagePlus imp)
|
int |
ImageMath.setup(java.lang.String arg,
ImagePlus imp)
|
int |
ScaleDialog.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Shadows.setup(java.lang.String arg,
ImagePlus imp)
|
int |
SaltAndPepper.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Binary.setup(java.lang.String arg,
ImagePlus imp)
|
int |
RankFilters.setup(java.lang.String arg,
ImagePlus imp)
Setup of the PlugInFilter. |
int |
ThresholdToSelection.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Writer.setup(java.lang.String arg,
ImagePlus imp)
|
int |
LutApplier.setup(java.lang.String arg,
ImagePlus imp)
|
int |
FFTCustomFilter.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Duplicater.setup(java.lang.String arg,
ImagePlus imp)
|
int |
FractalBoxCounter.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Analyzer.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Filler.setup(java.lang.String arg,
ImagePlus imp)
|
int |
PlugInFilter.setup(java.lang.String arg,
ImagePlus imp)
This method is called once when the filter is loaded. |
int |
ImageProperties.setup(java.lang.String arg,
ImagePlus imp)
|
int |
LutViewer.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Rotator.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Filters.setup(java.lang.String arg,
ImagePlus imp)
|
int |
UnsharpMask.setup(java.lang.String arg,
ImagePlus imp)
Method to return types supported |
int |
AVIWriter.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Calibrator.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Printer.setup(java.lang.String arg,
ImagePlus imp)
|
int |
MaximumFinder.setup(java.lang.String arg,
ImagePlus imp)
Method to return types supported |
int |
Info.setup(java.lang.String arg,
ImagePlus imp)
|
int |
BackgroundSubtracter.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Convolver.setup(java.lang.String arg,
ImagePlus imp)
|
int |
XYWriter.setup(java.lang.String arg,
ImagePlus imp)
|
int |
ParticleAnalyzer.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Transformer.setup(java.lang.String arg,
ImagePlus imp)
|
int |
RGBStackSplitter.setup(java.lang.String arg,
ImagePlus imp)
|
int |
CalibrationBar.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Profiler.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Projector.setup(java.lang.String arg,
ImagePlus imp)
|
int |
ZAxisProfiler.setup(java.lang.String arg,
ImagePlus imp)
|
int |
BinaryFiller.setup(java.lang.String arg,
ImagePlus imp)
|
int |
Benchmark.setup(java.lang.String arg,
ImagePlus imp)
|
int |
EDM.setup(java.lang.String arg,
ImagePlus imp)
|
(package private) boolean |
FFTFilter.showBandpassDialog(ImagePlus imp)
|
(package private) void |
ImageProperties.showDialog(ImagePlus imp)
|
boolean |
Calibrator.showDialog(ImagePlus imp)
|
int |
GaussianBlur.showDialog(ImagePlus imp,
java.lang.String command,
PlugInFilterRunner pfr)
Ask the user for the parameters |
int |
ExtendedPlugInFilter.showDialog(ImagePlus imp,
java.lang.String command,
PlugInFilterRunner pfr)
This method is called after setup(arg, imp) unless the
DONE flag has been set. |
int |
RankFilters.showDialog(ImagePlus imp,
java.lang.String command,
PlugInFilterRunner pfr)
|
int |
Rotator.showDialog(ImagePlus imp,
java.lang.String command,
PlugInFilterRunner pfr)
|
int |
UnsharpMask.showDialog(ImagePlus imp,
java.lang.String command,
PlugInFilterRunner pfr)
Ask the user for the parameters |
int |
MaximumFinder.showDialog(ImagePlus imp,
java.lang.String command,
PlugInFilterRunner pfr)
|
int |
Convolver.showDialog(ImagePlus imp,
java.lang.String command,
PlugInFilterRunner pfr)
|
void |
RGBStackSplitter.split(ImagePlus imp)
Splits the specified RGB image or stack into three 8-bit grayscale images or stacks. |
(package private) void |
Benchmark.updateScreen(ImagePlus imp)
|
void |
AVIWriter.writeImage(ImagePlus imp)
|
(package private) double |
Info.yy(double y,
ImagePlus imp)
|
(package private) int |
Info.yy(int y,
ImagePlus imp)
|
(package private) ImagePlus |
Projector.zScale(ImagePlus imp)
|
| Constructors in ij.plugin.filter with parameters of type ImagePlus | |
|---|---|
Analyzer(ImagePlus imp)
Constructs a new Analyzer using the specified ImagePlus object and the system-wide measurement options and results table. |
|
Analyzer(ImagePlus imp,
int measurements,
ij.measure.ResultsTable rt)
Construct a new Analyzer using an ImagePlus object and private measurement options and results table. |
|
LutWindow(ImagePlus imp,
ij.gui.ImageCanvas ic,
ImageProcessor ip)
|
|
| Uses of ImagePlus in ij.process |
|---|
| Fields in ij.process declared as ImagePlus | |
|---|---|
(package private) ImagePlus |
StackConverter.imp
|
| Methods in ij.process with parameters of type ImagePlus | |
|---|---|
(package private) void |
StackStatistics.doCalculations(ImagePlus imp,
int bins,
double histogramMin,
double histogramMax)
|
| Constructors in ij.process with parameters of type ImagePlus | |
|---|---|
ImageConverter(ImagePlus imp)
Constructs an ImageConverter based on an ImagePlus object. |
|
StackConverter(ImagePlus imp)
|
|
StackStatistics(ImagePlus imp)
|
|
StackStatistics(ImagePlus imp,
int nBins,
double histMin,
double histMax)
|
|
| Uses of ImagePlus in org.lego.navigation.img |
|---|
| Methods in org.lego.navigation.img that return ImagePlus | |
|---|---|
(package private) ImagePlus |
ScanNeu.erstelleMaskeHSV(Farbe farbe)
|
(package private) ImagePlus |
ScanNeu.erstelleMaskeHSV(Farbe farbe,
boolean verwendeHelligkeit)
Durchsucht das aktuelle Bild nach dem übergebenen Farbton und erstellt daraus ein Schwarz-Weiß-Bild |
(package private) ImagePlus |
ScanNeu.erstelleMaskeRGB(Farbe f)
Durchsucht das aktuelle Bild nach dem übergebenen Farbton und erstellt daraus ein Schwarz-Weiß-Bild Es werden Punkte markiert, deren Abstand zum Übergebenen Punkt kleiner als der in der Config gespeicherte Maximalabstand ist. |
ImagePlus |
ScanNeu.findeDiff(java.awt.Image dunkel,
java.awt.Image hell)
Sucht nach Differenzen zwischen zwei Bildern. |
ImagePlus |
ScanNeu.findeDiffHSV(java.awt.Image dunkel,
java.awt.Image hell)
sucht nach Differenz zwischen übergebenem und gespeichertem Bild durch Helligkeitsvergleich Vergleicht dazu die Helligkeitswerte. |
| Methods in org.lego.navigation.img with parameters of type ImagePlus | |
|---|---|
(package private) ij.measure.ResultsTable |
ScanNeu.analyzeParticles(ImagePlus blackWhite,
ImagePlus ergebnis)
Hier wird der ParticleAnalyzer von ImageJ aufgerufen, um zusammenhängende Bereiche in der Maske zu finden. |
|
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